I had trouble getting the brakes fully bled on my bike. I ended up buying a cheap BIG syringe from a surgery supply store. (about $5)
Connect a piece of tubing over the end of the syringe, and the other end of the tubing over the brake bleeder.
Fill the master cylinder with fresh brake fluid.
Open the bleeder, and using the syringe, suck the fluid thru the line and into the syringe. It's a bit easier if you have two people as you have to make sure that you don't empty the master cylinder. Once you get nothing but fluid into the syringe,with no bubbles, tighten the bleeder.
Pull the hose off the bleeder, and push the plunger on the syringe, emptying the fluid into a catch container.
The other thing this method does is makes sure that you have completely replaced all the old fluid and moisture in the system.
Just be careful, brake fluid screws up paint! Cover it up.
Worked like a champ for me.